CDS

Accession Number TCMCG057C47188
gbkey CDS
Protein Id XP_018452228.1
Location join(1240457..1240643,1240733..1240858,1241018..1241116,1241584..1242260,1242348..1242596,1242678..1242806,1242907..1242975,1243042..1243152,1243332..1243439,1243518..1243628,1243711..1243797,1243912..1244007,1244067..1244174,1244248..1244331,1244429..1244494,1244751..1244855)
Gene LOC108823503
GeneID 108823503
Organism Raphanus sativus

Protein

Length 803aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596726.1
Definition PREDICTED: synaptonemal complex protein 1-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Synaptonemal complex protein 1-like isoform X1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K19533        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0000802        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCATATACTCGCTTTAGAGGAGAAACTGCAGAACGCTTTCAACGAGAATGCTAAGCTCAGGGTGATGCAAAAGGAGGATGAAAAGCTTTGGAGGGGGATGGAGTCCAAATTCTCTTCAACGAAGACTCTCTGTGATCAACTTACTGAGACTCTGCAACACTTGGCTTCCCAGGTTCAAGAAGCTGAGAAGGATAAAGAGCTCTTTGAGTCCAAGTTCTCTAGTAGTGCGGAAGTAATAGACTCTTTAAAGGAGAATTTGCAAGACCTGTCTTCAAGACTGGGTGCTTCTGAAGAAAACATCAAAAGACGGGAGAAGGAATTAGAGGATCTCAAACTCGAGAAAGAACAGACAGAGAACTCTTATCTGAATGAACAGTGTAGAACCGCCAGTCTCTTAAAGGAGAAAGATGCTACGATAATGAACTCCGAAGCAGCTATAGCTGAAGCAAAACTCAACATTGAAAATTTAAACCTCCAACTTGAGAAGGTGCGTGTTGAATTAACATCAAAGGAAGATGAGGCCAAATACCTTGTTGGAGTCAAGGAGAAGCTTGAACGAGACAAGATGGATATTCAGCTGATTGCTGATAATCTATCTGCGAAACTGATTACCTCAGACGAGGAAGTCAAGAAGCTCGAGGGATTTGTACACTCTTTGGCAACAGATTTGGCTGAATTGGACAAGAAGAACTTGACCTTCATGGAGAACTTTGATAAGCTAAATGGTTTATATGGCACTCACCTGATGTTGCTCCAAAAGGATAGAGATATTGCTTCTGATCGTGCTGGAAGATTGTATAATCAACTCCAAGGAGAGTTCTCGACTGTAACCCTCCAAAAAGAAGCTCTGCAGTCATCAGCCAACGAGTTATATGAACAAAAAGAGGAACTGAAGAAAGCTAAGGAGTCATTGGTTTCTCAACTAGCCGAGGAACGCTGCTCCGCAAAGCAGGCAATTGAAAAACTAGAGTCTGAAGCAAAATGTCTAGTTTCAACAAATACTGAAACAGAAGCAGTTCTAACGGAGCTGAAAGAGGAAATAGAAGCTTTGTTGGAGAAACTCAAGGCCTCTGAGAATAAAACGGAAGAATTGTTGTTAAAGCTTTCAACATCGGAGACTGAAAGCAAAGAGAACTATGAGAAGCTGCAGGCTGATGCACAGAGAAAGGCTGAAGAAATGGAGATTTTGCAGAAGGAGAGCGATAGCAACCTGTTGCGTCTCGATTCATTGTCAAAAGAAGTGAGCCAGCTCCAAAGCGTTATTGAAGAGAAAGAGCTTCTTATCAATCAATGCAAGGAAAACGAGAAGAAGCTGGATCAGAAAACAACAGAGGACAAGGAGCTACTAGCAGCTGCTGAAACCAAGCTTCTAGACGCGAAGAAGCAATATGATCTGATGCTGGAAAATAAACAGTTGGAATTATCTAGGCACTTGAAGGAGTTGTCACAGAGGAATGACCAGGCGATTAATGAAATCCGGAGGAAATATGATGAGGAGAAGCAGGAGATTATTAAAGCTGAAAAGGAAAAGGCTGAGAAGGTTATCAAAGAGTTATCCACTAAATATGATAAAGAAGTTTCTGACTGTAAAGCCGAATCAAAGCACCAATTGCTGACCATTCAGGAGGATCATGCTTCTCTGATACTCACTATCCGGGAGGAACATGAGAACAGGGAGTTCAATCTCAAAGCTAAGCACGATGAGGAACTGAGACAAGCTCAGATTCAGGCCGAAACTGAATTGAAAGAGAGGATAACAACAATCAGGAACGAGCATGATGTTCAACTGAAAGCATTTAAGTGTCAGTACGAAGATGATTGCAAGAAGCTGCAAGACGAATTAGACCTTCAGAGATCAAAAGAAGAGAGGCAAAGAGCTTTGTTGCAAATGCAGTGGAGGGTTATGAGTGACAAAGCTCCAGAAGAGCAAGAAGTGAGCTCTAGGAAGGAATACTCTGTCTCATCTGTGAAAGTGAGAGGTTCTCGTCCTCCTGCTAGCAGGAGAAGCCAGCATACCGCAGTGATGCTTGATGAAGATGAACAGGATTCTCCTTTTGTGAAGGAAGCAGAAACAACTGTGCCGAAGATGCTAAAGAAAGTTGAAAATGCAAATGCAAGAAGCATAATGAGCAGTCAAAAGCAACATAGCAAGGTGAATCGTAGTGAATATGAAGCTGAAGCGAAGGACTCGAGGACCACTAAGCGAAGGAAAACAAAAGGCACAGTCGTGTTTGAGGAGCCACAGAGGCGATTGACTCGGTTTACTTCACCCAAAACTAAGACCCCAAGAAGCATCGCTAAGGTGGCAGCCATAAGTAGCCATCCACCAAGATCAGCAAACATTGGAGATCTGTTTTCAGAAGGCTCACTCAACCCCTACGCTGATGATCCATATGCATTTGACTGA
Protein:  
MDHILALEEKLQNAFNENAKLRVMQKEDEKLWRGMESKFSSTKTLCDQLTETLQHLASQVQEAEKDKELFESKFSSSAEVIDSLKENLQDLSSRLGASEENIKRREKELEDLKLEKEQTENSYLNEQCRTASLLKEKDATIMNSEAAIAEAKLNIENLNLQLEKVRVELTSKEDEAKYLVGVKEKLERDKMDIQLIADNLSAKLITSDEEVKKLEGFVHSLATDLAELDKKNLTFMENFDKLNGLYGTHLMLLQKDRDIASDRAGRLYNQLQGEFSTVTLQKEALQSSANELYEQKEELKKAKESLVSQLAEERCSAKQAIEKLESEAKCLVSTNTETEAVLTELKEEIEALLEKLKASENKTEELLLKLSTSETESKENYEKLQADAQRKAEEMEILQKESDSNLLRLDSLSKEVSQLQSVIEEKELLINQCKENEKKLDQKTTEDKELLAAAETKLLDAKKQYDLMLENKQLELSRHLKELSQRNDQAINEIRRKYDEEKQEIIKAEKEKAEKVIKELSTKYDKEVSDCKAESKHQLLTIQEDHASLILTIREEHENREFNLKAKHDEELRQAQIQAETELKERITTIRNEHDVQLKAFKCQYEDDCKKLQDELDLQRSKEERQRALLQMQWRVMSDKAPEEQEVSSRKEYSVSSVKVRGSRPPASRRSQHTAVMLDEDEQDSPFVKEAETTVPKMLKKVENANARSIMSSQKQHSKVNRSEYEAEAKDSRTTKRRKTKGTVVFEEPQRRLTRFTSPKTKTPRSIAKVAAISSHPPRSANIGDLFSEGSLNPYADDPYAFD